PubMed MCP Server by Chris Mannina

MCP Servers Chevron right icon

PubMed

Provider

Chris Mannina

Classification

community

Est. Downloads

This is our estimate of how many downloads occurred of this server across the MCP ecosystem (not specific to any single platform). We use a mix of publicly available data, social signals, and more to feed an algorithm that drives this estimation.

2.4k (30 this week)

Released On

Jun 4, 2025

Popularity Ranking

Our estimate as to where this MCP server implementation ranks on the global leaderboard of usage.

#2,518 (#2,076 this week)

Integrates with NCBI PubMed to provide literature search, article retrieval, author-based searches, citation formatting in multiple styles, and research trend analysis for academic and bibliographic research workflows.

GitHub Repo (7 stars)

Related Servers

Simple PubMed

Andy Brandt

Access PubMed's medical research database via the Entrez API for biomedical literature search and analysis.

Classification

community

Est Downloads (All Time)

9.1k

Release Date

Dec 11, 2024

UniProt

TakumiY235

Integrates with UniProt API to provide cached protein information for bioinformatics applications and protein research.

Classification

community

Est Downloads (All Time)

1.3k

Release Date

Dec 8, 2024

PubMed

rikachu

Integrates with PubMed to enable searching, retrieving, and accessing medical research articles for evidence-based...

Classification

community

Est Downloads (All Time)

—

Release Date

Dec 12, 2024

Zotero

Abhishek Kalia

Integrates with Zotero to enable listing collections, retrieving item details, searching libraries, and fetching...

Classification

community

Est Downloads (All Time)

1.9k

Release Date

Dec 20, 2024

Semantic Scholar

YU Zongmin

Integrates with Semantic Scholar API to enable academic literature search, citation analysis, and paper...

Classification

community

Est Downloads (All Time)

12.1k

Release Date

Dec 25, 2024

Literature Memory

YU Zongmin

Integrates academic literature management with knowledge graphs to enable efficient source analysis, note-taking, and...

Classification

community

Est Downloads (All Time)

448

Release Date

Dec 27, 2024

Scholarly (arXiv)

Aditya Karnam

Integrates with arXiv to enable keyword-based searching and retrieval of academic articles for research assistance...

Classification

community

Est Downloads (All Time)

24.9k

Release Date

Jan 1, 2025

Semantic Scholar

Benhao Tang

Integrates with the Semantic Scholar API to enable querying academic papers, authors, and citations for research and...

Classification

community

Est Downloads (All Time)

2.8k

Release Date

Jan 5, 2025

PubMed Search

wavelovey

Integrates with PubMed to enable natural language querying and analysis of biomedical literature for research and...

Classification

community

Est Downloads (All Time)

6.9k

Release Date

Jan 8, 2025

Pocket

kazuph

Integrates with the Pocket API to enable natural language-based retrieval and management of saved articles.

Classification

community

Est Downloads (All Time)

4.6k

Release Date

Dec 26, 2024

PaperSearch (arXiv)

Lincest

Integrates with arXiv to enable keyword searches, paper retrieval, and tracking of recent submissions across...

Classification

community

Est Downloads (All Time)

597

Release Date

Jan 8, 2025

PubMed

Guillaume Raille

Integrates PubMed data for searching and fetching biomedical literature, enabling dynamic querying and analysis of...

Classification

community

Est Downloads (All Time)

13.5k

Release Date

Jan 8, 2025

Zotero

Aaron Taylor

Integrates with Zotero to enable searching libraries, retrieving metadata, and accessing full-text content for...

Classification

community

Est Downloads (All Time)

6.7k

Release Date

Jan 27, 2025

Academic Paper Search

afrise

Integrates with academic APIs to enable searching, retrieving, and filtering scholarly papers across multiple sources...

Classification

community

Est Downloads (All Time)

13k

Release Date

Feb 8, 2025

Zotero

Swair Shah

Integrates with Zotero to enable searching papers, managing notes, and interacting with local libraries for enhanced...

Classification

community

Est Downloads (All Time)

Release Date

Feb 25, 2025

DBLP

Stefan Szeider

Integrates with the DBLP computer science bibliography database to enable searching publications, processing...

Classification

community

Est Downloads (All Time)

2.2k

Release Date

Feb 28, 2025

WebSearch Tools

m4s1t4

Integrates with web search APIs and crawling tools to enable internet-wide information retrieval, content extraction,...

Classification

community

Est Downloads (All Time)

149

Release Date

Mar 4, 2025

arXiv

huanongfish

Integrates with arXiv to enable flexible paper search, PDF downloading, and text extraction for literature review,...

Classification

community

Est Downloads (All Time)

896

Release Date

Mar 4, 2025

PubMed Search

gradusnikov

Integrates with PubMed database via NCBI E-utilities API to search and retrieve academic papers, including titles,...

Classification

community

Est Downloads (All Time)

896

Release Date

Mar 7, 2025

Knowledge Base

Geeksfino

Integrates with knowledge bases to enable searching, retrieving, and potentially updating information from structured...

Classification

community

Est Downloads (All Time)

Release Date

Mar 11, 2025

CiteAssist (Citation Retrieval)

Nikolay Chikin

Integrates with CiteAs and Google Scholar to retrieve BibTeX-formatted citation data using DOIs, URLs, or keywords...

Classification

community

Est Downloads (All Time)

1.9k

Release Date

Mar 18, 2025

PapersWithCode

hbg

Integrates with PapersWithCode API to search and retrieve research papers, authors, conferences, and code...

Classification

community

Est Downloads (All Time)

2.4k

Release Date

Mar 18, 2025

NIH RePORTER

John Damask

Provides a conversational interface to the NIH's research database, enabling users to search for funded projects and...

Classification

community

Est Downloads (All Time)

—

Release Date

Mar 19, 2025

bioRxiv

Jack Kuo

Provides a specialized interface for searching and retrieving bioRxiv scientific articles through keyword-based...

Classification

community

Est Downloads (All Time)

Release Date

Mar 19, 2025

medRxiv Research

Jack Kuo

Provides a specialized interface for searching and retrieving medical research articles from medRxiv using...

Classification

community

Est Downloads (All Time)

896

Release Date

Mar 19, 2025

PubMed Smithery

Lee Scot

Provides powerful tools for searching and analyzing academic medical literature through PubMed, offering specialized...

Classification

community

Est Downloads (All Time)

747

Release Date

Mar 22, 2025

MedAdapt

Provides medical students and educators with curated educational resources from PubMed and NCBI Bookshelf through a...

Classification

community

Est Downloads (All Time)

896

Release Date

Mar 22, 2025

bioRxiv

Jack Kuo

Enables searching and retrieving scientific articles from bioRxiv through keyword-based queries, advanced parameter...

Classification

community

Est Downloads (All Time)

—

Release Date

Mar 15, 2025

Zotero

gh-54yyyu

Enables direct interaction with Zotero reference management libraries for searching literature, retrieving metadata...

Classification

community

Est Downloads (All Time)

115k

Release Date

Mar 23, 2025

PubMed

Jack Kuo

Provides a bridge to PubMed for searching, filtering, retrieving, and analyzing medical research articles with tools...

Classification

community

Est Downloads (All Time)

12.3k

Release Date

Mar 19, 2025

Scientific Paper Analyzer (Gemini)

Pritesh Shah

Integrates with Google's Gemini API to enable searching, analyzing and exploring academic research papers with tools...

Classification

community

Est Downloads (All Time)

448

Release Date

Mar 25, 2025

Semantic Scholar

Jack Kuo

Provides a bridge to Semantic Scholar for searching and analyzing academic papers with tools for keyword searches,...

Classification

community

Est Downloads (All Time)

5.5k

Release Date

Mar 25, 2025

PaperPal

Jeremy Pinto

Connects LLMs to academic research sources for semantic paper searches and detailed information retrieval from arXiv...

Classification

community

Est Downloads (All Time)

1.5k

Release Date

Mar 29, 2025

BioMCP (Biomedical Database Integration)

GenomOncology

Integrates with biomedical databases including ClinicalTrials.gov, PubMed, and MyVariant.info to provide structured...

Classification

official

Est Downloads (All Time)

68k

Release Date

Apr 5, 2025

PubMed Searcher

Darkroaster

Search, retrieve, and analyze scientific literature from PubMed with capabilities for identifying research trends and...

Classification

community

Est Visitors (All Time)

89.7k

Release Date

Apr 6, 2025

PubMed Medical Literature Research

Felix Wu

Enables search, retrieval, and analysis of academic medical literature through the NCBI PubMed database with...

Classification

community

Est Downloads (All Time)

149

Release Date

Apr 22, 2025

PubMed

cyanheads

Enables AI systems to search, retrieve, and analyze biomedical literature from PubMed for evidence-based research,...

Classification

community

Est Downloads (All Time)

9.5k

Release Date

May 25, 2025

arXiv

Izzan Zahrial

Integrates with arXiv to enable searching and retrieving academic papers with structured data about scientific...

Classification

community

Est Downloads (All Time)

—

Release Date

May 26, 2025

UniProt

Augmented Nature

Integrates with UniProt's protein database through 26 specialized bioinformatics tools for protein searches, sequence...

Classification

community

Est Downloads (All Time)

—

Release Date

May 27, 2025

Semantic Scholar

alperenkocyigit

Integrates with Semantic Scholar's academic database to search research papers, retrieve author information, analyze...

Classification

community

Est Downloads (All Time)

597

Release Date

May 29, 2025

PubChem

Augmented Nature

Integrates with PubChem chemical database to provide compound search, structure analysis, property calculation,...

Classification

community

Est Downloads (All Time)

4.5k

Release Date

May 30, 2025

arXiv

Mnehmos

Integrates with arXiv's preprint repository to search academic papers by keywords, categories, authors, and titles...

Classification

community

Est Downloads (All Time)

298

Release Date

Jun 12, 2025

arXiv

Emi

Integrates with arXiv academic repository to provide paper search by keywords, authors, or categories, content...

Classification

community

Est Downloads (All Time)

896

Release Date

Jun 27, 2025

BioContext Knowledgebase

BioContextAI Team

Provides unified access to over 20 biomedical databases and research tools including protein databases (UniProt,...

Classification

community

Est Visitors (All Time)

13.6k

Release Date

Jul 15, 2025

arXiv

Anuj

Integrates with arXiv's academic paper repository to enable searching, analyzing, and managing research papers with...

Classification

community

Est Downloads (All Time)

1.8k

Release Date

Aug 3, 2025

Google News & Trends

Jesse Manek

Integrates with Google News RSS feeds and Google Trends to provide news article search, trending topic retrieval, and...

Classification

community

Est Downloads (All Time)

10.8k

Release Date

Aug 2, 2025

BioPortal

Augmented Nature

Integrates with BioPortal's API to search, annotate, and explore over 1,200 biological ontologies including medical...

Classification

community

Est Downloads (All Time)

1.2k

Release Date

Aug 14, 2025

Reactome

Augmented Nature

Integrates with Reactome's curated biological pathway database to search pathways by keywords, genes, or diseases,...

Classification

community

Est Downloads (All Time)

1.2k

Release Date

Aug 14, 2025

Zotero

cookjohn

Integrates with Zotero reference management software through a dual-component architecture to provide access to...

Classification

community

Est Downloads (All Time)

24.5k

Release Date

Aug 15, 2025

Paperclip

Mats Julius Funke

Integrates with ArXiv, OpenAlex, and Open Science Framework to provide unified academic paper search, metadata...

Classification

community

Est Visitors (All Time)

10.8k

Release Date

Aug 15, 2025

PubMed Research

aringadre76

Integrates with PubMed's biomedical literature database to search academic papers, retrieve detailed metadata and...

Classification

community

Est Downloads (All Time)

880

Release Date

Aug 20, 2025

Unpaywall

ElliotPadfield

Integrates with Unpaywall's database to find open access versions of academic papers and retrieve publication...

Classification

community

Est Downloads (All Time)

149

Release Date

Aug 22, 2025

arXiv Research

juananpe

Integrates with arXiv API to provide academic paper discovery, metadata extraction, and topic-based organization with...

Classification

community

Est Downloads (All Time)

298

Release Date

Sep 16, 2025

AMiner

Scipen AI

Integrates with AMiner's academic database to provide paper search by keyword, venue, author, or advanced...

Classification

community

Est Downloads (All Time)

113

Release Date

Sep 19, 2025

UniProt

Jose Duarte

Integrates with UniProtKB protein database to provide complete protein entries, sequences, filtered searches, and ID...

Classification

community

Est Downloads (All Time)

503

Release Date

Oct 28, 2025

Semantic Scholar

Santiago Maniches

Integrates with Semantic Scholar's database of 200+ million academic papers to enable searching with filters,...

Classification

community

Est Downloads (All Time)

149

Release Date

Nov 26, 2025

Semantic Scholar

fegizii

Integrates with Semantic Scholar Academic Graph API to search papers, retrieve author profiles, analyze citations,...

Classification

community

Est Downloads (All Time)

448

Release Date

Nov 17, 2025

Medical APIs

James Sangalli

Integrates with FDA drug databases, WHO health indicators, RxNorm classifications, PubMed research, Google Scholar,...

Classification

community

Est Downloads (All Time)

448

Release Date

Nov 4, 2025

arXiv

Prashal Ruchiranga

Integrates with arXiv's academic paper database to search publications by title, author, or keywords, retrieve...

Classification

community

Est Downloads (All Time)

298

Release Date

Nov 3, 2025

Academia

Ilya Gusev

Integrates with ArXiv, ACL Anthology, Semantic Scholar, and Hugging Face datasets to enable scientific literature...

Classification

community

Est Downloads (All Time)

Release Date

Nov 3, 2025

Paper Search

P.S Zhang

Aggregates academic paper search and retrieval across arXiv, PubMed, bioRxiv, medRxiv, Google Scholar, IACR ePrint...

Classification

community

Est Downloads (All Time)

747

Release Date

Nov 3, 2025